Write a paper on Phylogeny Analysis of cytB – Molecular Evolution – Computational Biology and Quantitative Genetics
As a quick prearranging, this assignment involved very high level coding and computational biology skills. You must be familiar with R and evolutionary genetics in order to complete this assignment.
My name is Celia Lette and I am taking the module at level 6, so only one gene (cytB) has to be analyzed.
Please use R, Mr. Bayes, Phy ML and Fig Tree for the computational bits of the assignment and creation of the trees.
This website gives you most of the code needed for the coursework:
This website may help you as well:
https://cran.r-project.org/web/packages/phangorn/vignettes/Trees.html#branch-and-bound
